miRBase entry: pbv-mir-181b-1

Stem-loop pbv-mir-181b-1


Accession
MI0030256
Description
Python bivittatus pbv-mir-181b-1 precursor miRNA


Sequence

ggucacaaucaACAUUCAUUGCUGUCGGUGGGUUuaacuuuguggacaaGCUCACUGAACAAUGAAUGCAAcuguggcccca
(((((((.....(((((((((...(((((((((((..((....))..))))))))))).)))))))))....)))))))...

Structure
---       aucaA         CUG           aa  u 
   ggucaca     CAUUCAUUG   UCGGUGGGUUu  cu u
   |||||||     |||||||||   |||||||||||  ||  
   ccggugu     GUAAGUAAC   AGUCACUCGaa  gg g
acc       -cAAC         --A           ca  u 


Annotation confidence Not enough data
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Genome context
KE954498.1: 230953-231034 [+]

Database links

Mature pbv-miR-181b-5p

Accession MIMAT0038977
Description Python bivittatus pbv-miR-181b-5p mature miRNA
Sequence 12 - ACAUUCAUUGCUGUCGGUGGGUU - 34
Evidence experimental
Illumina [1]

Mature pbv-miR-181b-3p

Accession MIMAT0038978
Description Python bivittatus pbv-miR-181b-3p mature miRNA
Sequence 50 - GCUCACUGAACAAUGAAUGCAA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196