miRBase entry: pbv-mir-190b

Stem-loop pbv-mir-190b


Accession
MI0030263
Description
Python bivittatus pbv-mir-190b precursor miRNA


Sequence

cccagccucugucUGAUAUGUUUGAUAUUAAGUUGUucuccugggaaacccaacuaaauaucagacauauuccgacagcgacuggg
(((((.(.(((((.(((((((((((((((.(((((((((....))))...))))).)))))))))))))))..))))).).)))))

Structure
     c u     -U               A     ---    c 
cccag c cuguc  GAUAUGUUUGAUAUU AGUUG   Uucu c
||||| | |||||  ||||||||||||||| |||||   ||||  
ggguc g gacag  uuauacagacuauaa ucaac   aagg u
     a c     cc               a     cca    g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KE954141.1: 197438-197523 [-]

Database links

Mature pbv-miR-190b-5p

Accession MIMAT0038986
Description Python bivittatus pbv-miR-190b-5p mature miRNA
Sequence 14 - UGAUAUGUUUGAUAUUAAGUUGU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196