miRBase entry: pbv-mir-191

Stem-loop pbv-mir-191


Accession
MI0030264
Description
Python bivittatus pbv-mir-191 precursor miRNA


Sequence

ugggCAACGGAAUCCCAAAAGCAGCUGuuuuccucugagucuuccaGCUGCACUUGGAUUCCGUUCCUugcu
.(((.((((((((((.((..(((((((..(((....))).....)))))))..)))))))))))))))....

Structure
---u   C          C  AA       ---uu   c 
    ggg AACGGAAUCC AA  GCAGCUG     uuc u
    ||| |||||||||| ||  |||||||     |||  
    UCC UUGCCUUAGG UU  CGUCGac     gag c
ucgu   -          -  CA       cuucu   u 


Annotation confidence Not enough data
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Genome context
KE954653.1: 219600-219671 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from pbv-mir-191
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-191-5p

Accession MIMAT0038987
Description Python bivittatus pbv-miR-191-5p mature miRNA
Sequence 5 - CAACGGAAUCCCAAAAGCAGCUG - 27
Evidence experimental
Illumina [1]

Mature pbv-miR-191-3p

Accession MIMAT0038988
Description Python bivittatus pbv-miR-191-3p mature miRNA
Sequence 47 - GCUGCACUUGGAUUCCGUUCCU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196