Stem-loop pbv-mir-193a

Accession

MI0030265

Description

Python bivittatus pbv-mir-193a precursor miRNA

Sequence

gagcagcugggaguuuggggcUGGGUCUUUGCGGGCGAGAUGAgaaguuucugccuucAACUGGCCUACAAAGUCCCAGUucucggcucuuaacuuugc
..((((.((((((((.(((((((((.(((((.((((.((.((((..((....)).)))).)).)))).))))).))))))))).))))))))...))))

Structure

ga    --c        u         U     C    G  A    aa  u 
  gcag   ugggaguu ggggcUGGG CUUUG GGGC AG UGAg  gu u
  ||||   |||||||| ||||||||| ||||| |||| || ||||  ||  
  cguu   auucucgg ucuUGACCC GAAAC UCCG UC Acuu  cg c
--    uca        c         U     A    G  A    -c  u 

Annotation confidence Not enough data

Genome context

KE956678.1: 106909-107007 [-]

Mature pbv-miR-193a-5p

• Accession: MIMAT0038989
• Description: Python bivittatus pbv-miR-193a-5p mature miRNA
• Sequence: 22 - UGGGUCUUUGCGGGCGAGAUGA - 43
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-193a-3p

• Accession: MIMAT0038990
• Description: Python bivittatus pbv-miR-193a-3p mature miRNA
• Sequence: 59 - AACUGGCCUACAAAGUCCCAGU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196