miRBase entry: pbv-mir-206

Stem-loop pbv-mir-206

Accession

MI0030283

Description

Python bivittatus pbv-mir-206 precursor miRNA

Sequence

uuucucuuuuugaggggacacgcuucuuuauaaucccauaugaauuacauugcuaUGGAAUGUAAGGAAGUGUGUGGuuucagaaagaugaac
.((((((((((((((..(((((((((((((((.(((.(((..(((...)))..)))))).)))))))))))))))..))))))))))).))).

Structure

u   -           gg               a   c   ug   u 
 uuc ucuuuuugagg  acacgcuucuuuaua ucc aua  aau  
 ||| |||||||||||  ||||||||||||||| ||| |||  ||| a
 aag agaaagacuuu  UGUGUGAAGGAAUGU AGG Uau  uua  
c   u           GG               A   -   cg   c

Annotation confidence Not enough data

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Genome context

KE957741.1: 75288-75380 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-206

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-206-3p

Accession	MIMAT0039011
Description	Python bivittatus pbv-miR-206-3p mature miRNA
Sequence	56 - UGGAAUGUAAGGAAGUGUGUGG - 77
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196