miRBase entry: pbv-mir-365-1

Stem-loop pbv-mir-365-1

Accession

MI0030304

Description

Python bivittatus pbv-mir-365-1 precursor miRNA

Sequence

gcagggaaaaugagggacuuuugggggcagcuguguucuuccaugcuaccauAAUGCCCCUAAAAAUCCUUAuugcucuugc
((((((..((((((((..(((((((((((..((((..............)))).))))))))))).))))))))..))))))

Structure

      aa        ac           gc    uucuuc 
gcaggg  aaugaggg  uuuugggggca  ugug      c
||||||  ||||||||  |||||||||||  ||||       
cguucu  uuAUUCCU  AAAAUCCCCGU  Auac      a
      cg        -A           -A    caucgu

Annotation confidence Not enough data

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Genome context

KE956029.1: 2935-3016 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-365-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-365-3p

Accession	MIMAT0039044
Description	Python bivittatus pbv-miR-365-3p mature miRNA
Sequence	53 - AAUGCCCCUAAAAAUCCUUA - 72
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196