Stem-loop pbv-mir-455

Accession

MI0030315

Description

Python bivittatus pbv-mir-455 precursor miRNA

Sequence

gaucccuggugugagggUAUGUGCCCUUGGACUACAUcguggaaaauaucaccauGCAGUCCAUGGGCAUAUACACuugccccaagguuuc
((..(((((.(((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))).)).)))..))

Structure

  uc   -  u     g          U      A   c   gaa 
ga  ccu gg gugag gUAUGUGCCC UGGACU CAU gug   a
||  ||| || ||||| |||||||||| |||||| ||| |||    
cu  gga cc cguuC CAUAUACGGG ACCUGA Gua cac   a
  uu   a  c     A          U      C   c   uau 

Annotation confidence Not enough data

Genome context

KE954676.1: 196967-197057 [-]

Mature pbv-miR-455-5p

• Accession: MIMAT0039057
• Description: Python bivittatus pbv-miR-455-5p mature miRNA
• Sequence: 18 - UAUGUGCCCUUGGACUACAU - 37
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-455-3p

• Accession: MIMAT0039058
• Description: Python bivittatus pbv-miR-455-3p mature miRNA
• Sequence: 56 - GCAGUCCAUGGGCAUAUACAC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196