miRBase entry: pbv-mir-458

Stem-loop pbv-mir-458


Accession
MI0030317
Description
Python bivittatus pbv-mir-458 precursor miRNA


Sequence

cauggugcagauggcagcgccauuuucagagcuauaaacaguaucauugucAUAGCUCUUUGAAUGGUACUGCcguauguaccg
...((((((.(((((((.(((((((..((((((((..(((((...))))).))))))))..))))))).))))))).)))))).

Structure
cau      g       c       uc        aa     a 
   ggugca auggcag gccauuu  agagcuau  acagu  
   |||||| ||||||| |||||||  ||||||||  ||||| u
   ccaugu ugcCGUC UGGUAAG  UCUCGAUA  uguua  
--g      a       A       UU        -c     c 


Annotation confidence Not enough data
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Genome context
KE959752.1: 25053-25136 [+]

Database links

Mature pbv-miR-458-3p

Accession MIMAT0039061
Description Python bivittatus pbv-miR-458-3p mature miRNA
Sequence 52 - AUAGCUCUUUGAAUGGUACUGC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196