miRBase entry: pbv-mir-490

Stem-loop pbv-mir-490


Accession
MI0030319
Description
Python bivittatus pbv-mir-490 precursor miRNA


Sequence

auguucaugauucgacaCCAUGGAUCUCCAGGUGGGUCaagauuauagagaaacaCCAACCUGGAGGACUCCAUGCUGuugagcuguucacaagc
.((..((.(.(((((((.(((((((((((((((.(((.................))).)))))))))..)))))).))))))))))..)).....

Structure
----a  uu  u a       C      --         G   Caagauu 
     ug  ca g uucgaca CAUGGA  UCUCCAGGU GGU       a
     ||  || | ||||||| ||||||  ||||||||| |||       u
     ac  gu c gaguuGU GUACCU  GGAGGUCCA CCa       a
cgaac  uu  - -       C      CA         A   caaagag 


Annotation confidence Not enough data
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Genome context
KE954944.1: 24235-24329 [-]

Database links

Mature pbv-miR-490-5p

Accession MIMAT0039063
Description Python bivittatus pbv-miR-490-5p mature miRNA
Sequence 18 - CCAUGGAUCUCCAGGUGGGUC - 38
Evidence experimental
Illumina [1]

Mature pbv-miR-490-3p

Accession MIMAT0039064
Description Python bivittatus pbv-miR-490-3p mature miRNA
Sequence 56 - CCAACCUGGAGGACUCCAUGCUG - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196