miRBase entry: pbv-mir-875

Stem-loop pbv-mir-875


Accession
MI0030325
Description
Python bivittatus pbv-mir-875 precursor miRNA


Sequence

guuuagugguacAAUACCUCAGCCUUAUCAGGUGcuauauauauauucaccuggaaguucugagguugaguuucacugaac
(((((((((.((...(((((((.(((.(((((((..(((....))).))))))))))..)))))))...)).)))))))))

Structure
         u  AAU       -C   A       cu   u 
guuuagugg ac   ACCUCAG  CUU UCAGGUG  aua a
||||||||| ||   |||||||  ||| |||||||  |||  
caagucacu ug   uggaguc  gaa gguccac  uau u
         u  agu       uu   -       -u   a 


Annotation confidence Not enough data
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Genome context
KE953831.1: 12652-12732 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pbv-mir-875
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-875-5p

Accession MIMAT0039073
Description Python bivittatus pbv-miR-875-5p mature miRNA
Sequence 13 - AAUACCUCAGCCUUAUCAGGUG - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196