Stem-loop pbv-mir-1805

Accession

MI0030334

Description

Python bivittatus pbv-mir-1805 precursor miRNA

Sequence

gaauggaauauucuaggAGUUGUAGUGUUUCAAACAGAgcuuugcaagaacauaccUGUAUUGGAACACUACAGCUCCaggaacuuccuagugu
....((((..((((.((((((((((((((((((((((..................)))).))))))))))))))))))))))..))))......

Structure

--gaau    ua    a                  -    Agcuuugc 
      ggaa  uucu ggAGUUGUAGUGUUUCAA ACAG        a
      ||||  |||| |||||||||||||||||| ||||         
      ccuu  agga CCUCGACAUCACAAGGUU UGUc        a
ugugau    ca    -                  A    cauacaag 

Annotation confidence Not enough data

Genome context

KE957885.1: 57314-57407 [+]

Mature pbv-miR-1805-5p

• Accession: MIMAT0039087
• Description: Python bivittatus pbv-miR-1805-5p mature miRNA
• Sequence: 18 - AGUUGUAGUGUUUCAAACAGA - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-1805-3p

• Accession: MIMAT0039088
• Description: Python bivittatus pbv-miR-1805-3p mature miRNA
• Sequence: 57 - UGUAUUGGAACACUACAGCUCC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196