miRBase entry: mmu-mir-935

Stem-loop mmu-mir-935


Accession
MI0030346
Description
Mus musculus mmu-mir-935 precursor miRNA
Gene family
MIPF0000606; mir-935

Literature search
1 open access papers mention mmu-mir-935
(1 sentences)

Sequence

2216 reads, 28 reads per million, 60 experiments
ggcggcggcgcgggcggcaguggcgggagcggccccucggccauccuccgucugCCCAGUUACCGCUUCCGCUACCGCcgccgcucccgcu
(((((.((.((((.((((.(((((((((((((...((.(((............))).))...))))))))))))).)))))))))))))))

Structure
     c  c    g    a             ccc  c   caucc 
ggcgg gg gcgg cggc guggcgggagcgg   cu ggc     u
||||| || |||| |||| |||||||||||||   || |||      
ucgcc cu cgcc gcCG CAUCGCCUUCGCC   GA CCg     c
     -  -    -    C             AUU  C   ucugc 


Annotation confidence Not enough data
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Genome context
chr7: 3415066-3415156 [+]

Database links

Mature mmu-miR-935

Accession MIMAT0035718
Description Mus musculus mmu-miR-935 mature miRNA
Sequence 55 - CCCAGUUACCGCUUCCGCUACCGC - 78
Evidence experimental
RNAseq-metaanalysis [1]
Database links
Predicted targets

References

  1. PubMed ID: 23329697
    Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
    "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
    "RNA (2013) 19:365-379