Stem-loop rno-let-7g

Accession

MI0030347

Description

Rattus norvegicus rno-let-7g precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

92 open access papers mention rno-let-7g
(472 sentences)

Sequence

3469356 reads, 2878 reads per million, 504 experiments

ccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCcagg
((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))

Structure

  a   U        A            ugagg    -a  a    a 
cc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
|| ||| |||||||| ||||||||||||     ||||  || ||||  
gg cCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
  a   -        C            -----    gg  -    c 

Annotation confidence High

Genome context

chr8: 114874457-114874544 [+]

Mature rno-let-7g-5p

• Accession: MIMAT0035719
• Description: Rattus norvegicus rno-let-7g-5p mature miRNA
• Sequence: 7 - UGAGGUAGUAGUUUGUACAGUU - 28
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature rno-let-7g-3p

• Accession: MIMAT0035720
• Description: Rattus norvegicus rno-let-7g-3p mature miRNA
• Sequence: 64 - CUGUACAGGCCACUGCCUUGC - 84
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379