Stem-loop rno-mir-1843b

Accession

MI0030353

Description

Rattus norvegicus rno-mir-1843b precursor miRNA

Gene family

MIPF0001119; mir-1843

Literature search

6 open access papers mention rno-mir-1843b
(15 sentences)

Sequence

42251 reads, 76 reads per million, 485 experiments

aacAUGGAGGUCUCUGUCUGACUUAGgauagcuggcuaagUCUGAUCGUUCCCCUCCAUACa
...(((((((...(.(((.(((((((.........))))))).))).)....)))))))...

Structure

aac       -UCU U   U       gau 
   AUGGAGG    C GUC GACUUAG   a
   |||||||    | ||| |||||||   g
   UACCUCC    G UAG CUgaauc   c
aCA       CCUU C   U       ggu 

Annotation confidence High

Genome context

chr13: 77065446-77065507 [+]

Mature rno-miR-1843b-5p

• Accession: MIMAT0035730
• Description: Rattus norvegicus rno-miR-1843b-5p mature miRNA
• Sequence: 4 - AUGGAGGUCUCUGUCUGACUUAG - 26
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature rno-miR-1843b-3p

• Accession: MIMAT0035731
• Description: Rattus norvegicus rno-miR-1843b-3p mature miRNA
• Sequence: 41 - UCUGAUCGUUCCCCUCCAUAC - 61
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379