Stem-loop rno-mir-1896

Accession

MI0030354

Description

Rattus norvegicus rno-mir-1896 precursor miRNA

Gene family

MIPF0001981; mir-1896

Sequence

reads, None reads per million, experiments

aaggcuuucccacacucauuacaaugaugucuuuuggaacgaccauggacucucugaUGGUGGGUGAGGAGGAGGgcccga
..(((((((((.(((((((((((..((.((((..(((.....))).))))))..)).)))))))))..).))))))))...

Structure

-aa        - -a         -  au  u    uu   a 
   ggcuuucc c  cacucauua ca  ga gucu  ugg a
   |||||||| |  ||||||||| ||  || ||||  ||| c
   ccgGGAGG G  GUGGGUGGU gu  cu cagg  acc g
agc        A GA         a  cu  -    -u   a 

Annotation confidence Not enough data

Genome context

chr17: 45204282-45204362 [-]

Mature rno-miR-1896

• Accession: MIMAT0035732
• Description: Rattus norvegicus rno-miR-1896 mature miRNA
• Sequence: 58 - UGGUGGGUGAGGAGGAGG - 75
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379