miRBase entry: rno-mir-5132

Stem-loop rno-mir-5132


Accession
MI0030364
Description
Rattus norvegicus rno-mir-5132 precursor miRNA
Gene family
MIPF0002061; mir-5132


Sequence

258 reads, 11 reads per million, 143 experiments
caggccgaCGUGGGGCGGUGGACCCAGGCUucuggagcugaagCCUGAUGUUCCCCGUCCCGCAGCggccu
.((((((..(((((((((.((((.((((((((.......))))))))..)))).)))))))))..))))))

Structure
c      aC         U    -C        ug 
 aggccg  GUGGGGCGG GGAC  CAGGCUuc  g
 ||||||  ||||||||| ||||  ||||||||  a
 uccggC  CGCCCUGCC CUUG  GUCCgaag  g
-      GA         C    UA        uc 


Annotation confidence Not enough data
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Genome context
chrX: 156716797-156716867 [+]

Database links

Mature rno-miR-5132-5p

Accession MIMAT0035750
Description Rattus norvegicus rno-miR-5132-5p mature miRNA
Sequence 9 - CGUGGGGCGGUGGACCCAGGCU - 30
Evidence experimental
RNAseq-metaanalysis [1]

Mature rno-miR-5132-3p

Accession MIMAT0035751
Description Rattus norvegicus rno-miR-5132-3p mature miRNA
Sequence 44 - CCUGAUGUUCCCCGUCCCGCAGC - 66
Evidence experimental
RNAseq-metaanalysis [1]

References

  1. PubMed ID: 23329697
    Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
    "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
    "RNA (2013) 19:365-379