miRBase entry: tae-MIR9658

Stem-loop tae-MIR9658


Accession
MI0030376
Description
Triticum aestivum tae-MIR9658 precursor miRNA

Literature search
1 open access papers mention tae-MIR9658
(2 sentences)

Sequence

2043 reads, 48 reads per million, 116 experiments
ucugguaacaauagauugggauucaggcgcaguucuuuugaccgauucucccagaauuuugagaaucgcaccuccuaaaccaauagguuuaagauugugagaacggucugauucucAUCGUUCUGGGUGAAUAGGCCaaaaaaccag
.(((((.......(((((.(.......).))))).(((((.((.((((.((((((((..((((((((........((((((....))))))(((((((....)))))))))))))))..)))))))).)))).)).))))).)))))

Structure
u     aacaauagauugggauucaggcgcaguuc     a  g    u        uu        gcaccuccuaaaccaauagguuua       g 
 cuggu                             uuuug cc auuc cccagaau  ugagaauc                        agauugu a
 |||||                             ||||| || |||| ||||||||  ||||||||                        |||||||  
 gacca                             aaaaC GG UAAG GGGUCUUG  Acucuuag                        ucuggca g
-     ----------------------------a     C  A    U        CU        ------------------------       a 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tae-miR9658-3p

Accession MIMAT0035766
Description Triticum aestivum tae-miR9658-3p mature miRNA
Sequence 117 - AUCGUUCUGGGUGAAUAGGCC - 137
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24734873
    Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
    Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
    BMC Genomics (2014) 15:289