Stem-loop bra-MIR6032

Accession

MI0030570

Description

Brassica rapa bra-MIR6032 precursor miRNA

Gene family

MIPF0002003; MIR6032

Literature search

1 open access papers mention bra-MIR6032
(1 sentences)

Sequence

uuauuuuguuuuAACAUGGAGCAUCAACAGAUCucggagcauguaagaucuguuguuuguccucggggaUCUGCUGGUCGUUCCAUGUUAAacuaaauaa
.(((((.((((.((((((((((((((.((((((((.(((((..(((......)))..))..))).)))))))).)))).)))))))))))))).))))).

Structure

u     u    u          -    A        g   --  ug   ga 
 uauuu guuu AACAUGGAGC AUCA CAGAUCuc gag  ca  uaa  u
 ||||| |||| |||||||||| |||| |||||||| |||  ||  |||   
 auaaa caAA UUGUACCUUG UGGU GUCUaggg cuc  gu  guu  c
a     u    -          C    C        g   cu  uu   gu 

Annotation confidence Not enough data

Genome context

chrA2: 7680879-7680978 [-]

Mature bra-miR6032-5p

• Accession: MIMAT0035862
• Description: Brassica rapa bra-miR6032-5p mature miRNA
• Sequence: 13 - AACAUGGAGCAUCAACAGAUC - 33
• Evidence: experimental ; Illumina [1]

Mature bra-miR6032-3p

• Accession: MIMAT0035863
• Description: Brassica rapa bra-miR6032-3p mature miRNA
• Sequence: 70 - UCUGCUGGUCGUUCCAUGUUAA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24559317
   Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis
   Jiang J, Lv M, Liang Y, Ma Z, Cao J
   BMC Genomics (2014) 15:146