miRBase entry: chi-mir-103

Stem-loop chi-mir-103


Accession
MI0030590
Description
Capra hircus chi-mir-103 precursor miRNA
Gene family
MIPF0000024; mir-103

Literature search
9 open access papers mention chi-mir-103
(137 sentences)

Sequence

gucuuugugcuuucAGCUUCUUUACAGUGCUGCCUUGUAGCAUUcaggucaAGCAGCAUUGUACAGGGCUAUGAaagaacuaagaa
.((((.((.(((((((((.((.(((((((((((.(((.(.(.....).))))))))))))))).)))))..)))))).)).)))).

Structure
g    u  g      --   U  U           C   U G A 
 ucuu gu cuuucA  GCU CU UACAGUGCUGC UUG A C U
 |||| || ||||||  ||| || ||||||||||| ||| | | U
 agaa ca gaaAGU  CGG GA AUGUUACGACG Aac u g c
a    u  a      AU   -  C           -   - g a 


Annotation confidence Not enough data
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Genome context
chr13: 51964308-51964393 [-]

Database links

Mature chi-miR-103-5p

Accession MIMAT0035901
Description Capra hircus chi-miR-103-5p mature miRNA
Sequence 15 - AGCUUCUUUACAGUGCUGCCUUGUAGCAUU - 44
Evidence experimental
Illumina [1]

Mature chi-miR-103-3p

Accession MIMAT0035902
Description Capra hircus chi-miR-103-3p mature miRNA
Sequence 52 - AGCAGCAUUGUACAGGGCUAUGA - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40