miRBase entry: chi-mir-107

Stem-loop chi-mir-107


Accession
MI0030595
Description
Capra hircus chi-mir-107 precursor miRNA
Gene family
MIPF0000024; mir-103

Literature search
4 open access papers mention chi-mir-107
(7 sentences)

Sequence

uucucucugcuuucagcuucuuuacaguguugccuuguggcauggaguucaAGCAGCAUUGUACAGGGCUAUcaaagcacagagagc
((((((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))))).

Structure
-      c      --c    u  u           c   u   a 
 uucucu ugcuuu   agcu cu uacaguguugc uug ggc u
 |||||| ||||||   |||| || ||||||||||| ||| ||| g
 gagaga acgaaa   UCGG GA AUGUUACGACG Aac uug g
c      c      cUA    -  C           -   -   a 


Annotation confidence Not enough data
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Genome context
chr26: 11322796-11322882 [-]

Database links

Mature chi-miR-107-3p

Accession MIMAT0035910
Description Capra hircus chi-miR-107-3p mature miRNA
Sequence 52 - AGCAGCAUUGUACAGGGCUAU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40