miRBase entry: chi-mir-1306

Stem-loop chi-mir-1306


Accession
MI0030614
Description
Capra hircus chi-mir-1306 precursor miRNA
Gene family
MIPF0000531; mir-1306

Literature search
1 open access papers mention chi-mir-1306
(1 sentences)

Sequence

gcgcugccccguggacagucuccaCCACCUCCCCUGCAAACGUCCagugaugcagacguaauggACGUUGGCUCUGGUGGUGAUGGacaggccgaacccccug
..((((((....)).)))).((((.((((.((...((.((((((((...(((....)))..)))))))).))...)).)))).))))((((........))))

Structure
gcgcugccccguggacaguc    C    U  CCU  A        gug   c 
                    ucca CACC CC   GC AACGUCCa   aug a
                    |||| |||| ||   || ||||||||   |||  
                    aGGU GUGG GG   CG UUGCAggu   ugc g
----gucccccaagccggac    A    U  UCU  G        -aa   a 


Annotation confidence Not enough data
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Genome context
chr17: 75044709-75044811 [+]

Database links

Mature chi-miR-1306-5p

Accession MIMAT0035939
Description Capra hircus chi-miR-1306-5p mature miRNA
Sequence 25 - CCACCUCCCCUGCAAACGUCC - 45
Evidence experimental
Illumina [1]

Mature chi-miR-1306-3p

Accession MIMAT0035940
Description Capra hircus chi-miR-1306-3p mature miRNA
Sequence 65 - ACGUUGGCUCUGGUGGUGAUGG - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40