miRBase entry: chi-mir-134

Stem-loop chi-mir-134


Accession
MI0030621
Description
Capra hircus chi-mir-134 precursor miRNA
Gene family
MIPF0000112; mir-134

Literature search
1 open access papers mention chi-mir-134
(1 sentences)

Sequence

uggugucagcaccguucagggugUGUGACUGGUUGACCAGAGGGGcaagcacuccguucacccucugggcugccucgucaccaacccucagcaccaaccgcaccugcc
.(((((.......(((.(((((..(((((.(((...((((((((...(((.....)))..))))))))...)))..)))))..))))).))).......)))))....

Structure
---u     cagcacc   c     gU     -U   UGA        Gca   a 
    ggugu       guu agggu  GUGAC  GGU   CCAGAGGG   agc c
    |||||       ||| |||||  |||||  |||   ||||||||   ||| u
    ccacg       cga uccca  cacug  ccg   ggucuccc   uug c
ccgu     ccaacca   c     ac     cu   ucg        -ac   c 


Annotation confidence Not enough data
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Genome context
chr21: 67131102-67131209 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from chi-mir-134
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-134

Accession MIMAT0035951
Description Capra hircus chi-miR-134 mature miRNA
Sequence 24 - UGUGACUGGUUGACCAGAGGGG - 45
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40