Stem-loop chi-mir-141

Accession

MI0030628

Description

Capra hircus chi-mir-141 precursor miRNA

Literature search

3 open access papers mention chi-mir-141
(4 sentences)

Sequence

gaccggcucuggguccaucuuccagcacaguguuggauggucuaauggugaagcuccUAACACUGUCUGGUAAAGAUGGcccccggcugg
..((((((..(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))))))..))))))

Structure

ga      cu   u       --    c        -   ugg  ua 
  ccggcu  ggg ccaucuu  ccag acaguguu gga   uc  a
  ||||||  ||| |||||||  |||| |||||||| |||   ||  u
  ggucgg  ccc GGUAGAA  GGUC UGUCACAA ccu   ag  g
--      cc   -       AU    -        U   cga  ug 

Annotation confidence Low

Genome context

chr5: 104155114-104155203 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-141

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40