miRBase entry: chi-mir-141

Stem-loop chi-mir-141


Accession
MI0030628
Description
Capra hircus chi-mir-141 precursor miRNA
Gene family
MIPF0000019; mir-8

Literature search
3 open access papers mention chi-mir-141
(4 sentences)

Sequence

gaccggcucuggguccaucuuccagcacaguguuggauggucuaauggugaagcuccUAACACUGUCUGGUAAAGAUGGcccccggcugg
..((((((..(((.(((((((((((.(((((((((((...((.......))...))).))))))))))))..))))))))))..))))))

Structure
ga      cu   u       --    c        -   ugg  ua 
  ccggcu  ggg ccaucuu  ccag acaguguu gga   uc  a
  ||||||  ||| |||||||  |||| |||||||| |||   ||  u
  ggucgg  ccc GGUAGAA  GGUC UGUCACAA ccu   ag  g
--      cc   -       AU    -        U   cga  ug 


Annotation confidence Not enough data
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Genome context
chr5: 104155114-104155203 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from chi-mir-141
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-141

Accession MIMAT0035962
Description Capra hircus chi-miR-141 mature miRNA
Sequence 58 - UAACACUGUCUGGUAAAGAUGG - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40