miRBase entry: chi-mir-146a

Stem-loop chi-mir-146a


Accession
MI0030633
Description
Capra hircus chi-mir-146a precursor miRNA
Gene family
MIPF0000103; mir-146

Literature search
6 open access papers mention chi-mir-146a
(10 sentences)

Sequence

ccuauguguauccucagcuuUGAGAACUGAAUUCCAUAGGUUgugucagugucagaccugugaaguuuaguucuuuagcugggauaucucugucauccu
.......((((((.(((((..((((((((((((.((((((((.((.......)))))))))).)))))))))))).)))))))))))............

Structure
-----ccuaugu      u     uU            C        g  uc 
            guaucc cagcu  GAGAACUGAAUU CAUAGGUU ug  a
            |||||| |||||  |||||||||||| |||||||| ||  g
            uauagg gucga  uucuugauuuga guguccag ac  u
uccuacugucuc      -     -u            a        -  ug 


Annotation confidence Not enough data
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Genome context
chr7: 72031491-72031589 [+]

Database links

Mature chi-miR-146a

Accession MIMAT0035971
Description Capra hircus chi-miR-146a mature miRNA
Sequence 21 - UGAGAACUGAAUUCCAUAGGUU - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40