miRBase entry: chi-mir-150

Stem-loop chi-mir-150


Accession
MI0030638
Description
Capra hircus chi-mir-150 precursor miRNA
Gene family
MIPF0000197; mir-150

Literature search
2 open access papers mention chi-mir-150
(4 sentences)

Sequence

ucucuucucauggcccugUCUCCCAACCCUUGUACCAGUGugugucuuggucccugguacagguacggggaggcagggaccuggggaucccagcagc
....((((((.(((((((((((((....((((((((((.(...........).))))))))))....))))))))))).))))))))..........

Structure
------ucuc      u  -           AACC          U ugug 
          uucuca gg cccugUCUCCC    CUUGUACCAG G    u
          |||||| || |||||||||||    |||||||||| |    c
          aggggu cc gggacggaggg    ggacaugguc c    u
cgacgacccu      -  a           gcau          c uggu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr18: 60483886-60483982 [-]

Database links

Mature chi-miR-150

Accession MIMAT0035980
Description Capra hircus chi-miR-150 mature miRNA
Sequence 19 - UCUCCCAACCCUUGUACCAGUG - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40