miRBase entry: chi-mir-155

Stem-loop chi-mir-155


Accession
MI0030643
Description
Capra hircus chi-mir-155 precursor miRNA
Gene family
MIPF0000157; mir-155

Literature search
8 open access papers mention chi-mir-155
(16 sentences)

Sequence

uugcugugggcugugugcuaUUAAUGCUAAUCGUGAUAGGGGUuuuuaccucggacugaCUCCUACAUGUUAGCAUUAACAgggcauggcgccuguuac
.......(((((((((.((.((((((((((.((((.((((((((....(....)...)))))))))))))))))))))).)).))))))).))......

Structure
uugcugu  -       g  a          U    A        uuua c 
       gg gcugugu cu UUAAUGCUAA CGUG UAGGGGUu    c u
       || ||||||| || |||||||||| |||| ||||||||    |  
       cc cgguacg gA AAUUACGAUU GUAC AUCCUCag    g c
-cauugu  g       g  C          -    -        -uca g 


Annotation confidence Not enough data
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Genome context
chr1: 10688698-10688796 [-]

Database links

Mature chi-miR-155-5p

Accession MIMAT0035988
Description Capra hircus chi-miR-155-5p mature miRNA
Sequence 21 - UUAAUGCUAAUCGUGAUAGGGGU - 43
Evidence experimental
Illumina [1]

Mature chi-miR-155-3p

Accession MIMAT0035989
Description Capra hircus chi-miR-155-3p mature miRNA
Sequence 60 - CUCCUACAUGUUAGCAUUAACA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40