miRBase entry: chi-mir-183

Stem-loop chi-mir-183


Accession
MI0030654
Description
Capra hircus chi-mir-183 precursor miRNA
Gene family
MIPF0000066; mir-183

Literature search
4 open access papers mention chi-mir-183
(9 sentences)

Sequence

ccagagagcgugacuccuguucugugUAUGGCACUGGUAGAAUUCACUgugaacagucucggucagugaauuaccgaagggccauaaacagagcagagacagauccgcga
.......(((.((((((((((((((.((((((.((((((..(((((((((((......)))..))))))))))))..)).)))))).))))))))).))..).)))))..

Structure
ccagaga   u  - --  -         g      A  --    GA        --   ac 
       gcg ga c  uc cuguucugu UAUGGC CU  GGUA  AUUCACUg  uga  a
       ||| || |  || ||||||||| |||||| ||  ||||  ||||||||  |||   
       cgc cu g  ag gacgagaca auaccg ga  ccau  uaagugac  gcu  g
-----ag   -  a ac  a         a      g  ag    --        ug   cu 


Annotation confidence Not enough data
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Genome context
chr4: 96232544-96232653 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from chi-mir-183
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-183

Accession MIMAT0036007
Description Capra hircus chi-miR-183 mature miRNA
Sequence 27 - UAUGGCACUGGUAGAAUUCACU - 48
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40