miRBase entry: chi-mir-190b

Stem-loop chi-mir-190b


Accession
MI0030663
Description
Capra hircus chi-mir-190b precursor miRNA
Gene family
MIPF0000076; mir-190

Literature search
1 open access papers mention chi-mir-190b
(1 sentences)

Sequence

ugcuucugugUGAUAUGUUUGAUAUUGGGUUGuuuaauuaggaaccaacuaaaugucaaacauauucuuacagcaguaggcaa
((((((((((((((((((((((((((.((((((((......))).))))).)))))))))))))))...))).))).))))).

Structure
-     -   -   ---               G     -   aa 
 ugcuu cug ugU   GAUAUGUUUGAUAUU GGUUG uuu  u
 ||||| ||| |||   ||||||||||||||| ||||| |||   
 acgga gac aca   uuauacaaacuguaa ucaac aag  u
a     u   g   uuc               a     c   ga 


Annotation confidence Not enough data
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Genome context
chr3: 17025879-17025961 [+]

Database links

Mature chi-miR-190b

Accession MIMAT0036021
Description Capra hircus chi-miR-190b mature miRNA
Sequence 11 - UGAUAUGUUUGAUAUUGGGUUG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40