miRBase entry: chi-mir-208b

Stem-loop chi-mir-208b


Accession
MI0030685
Description
Capra hircus chi-mir-208b precursor miRNA
Gene family
MIPF0000178; mir-208


Sequence

ccccaccuccuucuccucucagggaagcuuuuugcucgcguuauguuucucauccgaaUAUAAGACGAACAAAAGGUUUGucugagggcagagugcacccaccugggg
(((((......(((.((((((((.((((((((((.(((..((((((((.......))))))))..))).)))))))))).)))))))).)))(((....))).)))))

Structure
     -----ccuccu   c        g          c   cg        cu 
cccca           ucu cucucagg aagcuuuuug ucg  uuauguuu  c
|||||           ||| |||||||| |||||||||| |||  ||||||||  a
ggggu           aga gggagucu UUUGGAAAAC AGC  AAUAUaag  u
     ccacccacgug   c        G          A   AG        cc 


Annotation confidence Not enough data
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Genome context
chr10: 22160120-22160227 [+]

Database links

Mature chi-miR-208b

Accession MIMAT0036053
Description Capra hircus chi-miR-208b mature miRNA
Sequence 59 - UAUAAGACGAACAAAAGGUUUG - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40