Stem-loop chi-mir-218

Accession

MI0030694

Description

Capra hircus chi-mir-218 precursor miRNA

Gene family

MIPF0000026; mir-218

Literature search

1 open access papers mention chi-mir-218
(1 sentences)

Sequence

gaccagucgccgcggggcuuuccuUUGUGCUUGAUCUAACCAUGUgguggaacgauggaaacggaacaugguucugucaagcaccgcggaaagcaccgcgcucuccugca
...(((....(((((.(((((((...(((((((((..((((((((..((............))..))))))))..)))))))))...))))))).))))).....)))..

Structure

gac   -ucgc     g       uUU         CU        gg  gaacg 
   cag     cgcgg gcuuucc   GUGCUUGAU  AACCAUGU  ug     a
   |||     ||||| |||||||   |||||||||  ||||||||  ||      
   guc     gcgcc cgaaagg   cacgaacug  uugguaca  gc     u
-ac   cucuc     a       cgc         uc        ag  aaagg 

Annotation confidence Not enough data

Genome context

chr20: 583380-583489 [-]

Mature chi-miR-218

• Accession: MIMAT0036066
• Description: Capra hircus chi-miR-218 mature miRNA
• Sequence: 25 - UUGUGCUUGAUCUAACCAUGU - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40