miRBase entry: chi-mir-223

Stem-loop chi-mir-223


Accession
MI0030698
Description
Capra hircus chi-mir-223 precursor miRNA
Gene family
MIPF0000067; mir-223

Literature search
3 open access papers mention chi-mir-223
(16 sentences)

Sequence

ccagccuucugcagugccaugcucUGUGUAUUUGACAAGCUGAGUUGgacacuccauguaguagUGUCAGUUUGUCAAAUACCCCAagugcggcauaugccuagcag
...((.....((((((((.((((..(.((((((((((((((((.....((((.....)).))....)))))))))))))))).)..)))).))))).)))...))..

Structure
cca  cuucu   -     a    cU U                GUUGg  -  u 
   gc     gca gugcc ugcu  G GUAUUUGACAAGCUGA     ac ac c
   ||     ||| ||||| ||||  | ||||||||||||||||     || || c
   cg     cgu uacgg guga  C CAUAAACUGUUUGACU     ug ug a
-ga  --auc   a     c    AC C                -GUga  a  u 


Annotation confidence Not enough data
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Genome context
chrX: 88490300-88490406 [+]

Database links

Mature chi-miR-223-5p

Accession MIMAT0036071
Description Capra hircus chi-miR-223-5p mature miRNA
Sequence 25 - UGUGUAUUUGACAAGCUGAGUUG - 47
Evidence experimental
Illumina [1]

Mature chi-miR-223-3p

Accession MIMAT0036072
Description Capra hircus chi-miR-223-3p mature miRNA
Sequence 65 - UGUCAGUUUGUCAAAUACCCCA - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40