miRBase entry: chi-mir-224

Stem-loop chi-mir-224


Accession
MI0030699
Description
Capra hircus chi-mir-224 precursor miRNA
Gene family
MIPF0000088; mir-224

Literature search
1 open access papers mention chi-mir-224
(1 sentences)

Sequence

gggcuuuCAAGUCACUAGUGGUUCCGUUUaguagaugguuguacauuguuucaAAAUGGUACCCUAGUGACUACAaagccc
(((((((..(((((((((.(((.((((((.(..((((......))))....).)))))).))))))))))))..)))))))

Structure
       CA         U   U      a --ua    gu 
gggcuuu  AGUCACUAG GGU CCGUUU g    gaug  u
|||||||  ||||||||| ||| |||||| |    ||||   
cccgaaA  UCAGUGAUC CCA GGUAAA c    uuac  g
       CA         -   U      a uuug    au 


Annotation confidence Not enough data
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Genome context
chrX: 56575904-56575984 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from chi-mir-224
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-224-5p

Accession MIMAT0036073
Description Capra hircus chi-miR-224-5p mature miRNA
Sequence 8 - CAAGUCACUAGUGGUUCCGUUU - 29
Evidence experimental
Illumina [1]

Mature chi-miR-224-3p

Accession MIMAT0036074
Description Capra hircus chi-miR-224-3p mature miRNA
Sequence 54 - AAAUGGUACCCUAGUGACUACA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40