miRBase entry: chi-mir-24

Stem-loop chi-mir-24


Accession
MI0030713
Description
Capra hircus chi-mir-24 precursor miRNA
Gene family
MIPF0000041; mir-24

Literature search
5 open access papers mention chi-mir-24
(5 sentences)

Sequence

gacccgcccuccgGUGCCUACUGAGCUGAUAUCaguucucauuuuacacacUGGCUCAGUUCAGCAGGAACaggagucga
....((..((((.((.(((.(((((((((..(((((.............))))).))))))))).))).)).)))).)).

Structure
gacc  cc    g  G   A         UA     ucuca 
    cg  cucc GU CCU CUGAGCUGA  UCagu     u
    ||  |||| || ||| |||||||||  |||||     u
    gc  gagg CA GGA GACUUGACU  GGUca     u
---a  -u    a  A   C         -C     cacau 


Annotation confidence Not enough data
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Genome context
chr8: 82819368-82819447 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from chi-mir-24
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-24-5p

Accession MIMAT0036090
Description Capra hircus chi-miR-24-5p mature miRNA
Sequence 14 - GUGCCUACUGAGCUGAUAUC - 33
Evidence experimental
Illumina [1]

Mature chi-miR-24-3p

Accession MIMAT0036091
Description Capra hircus chi-miR-24-3p mature miRNA
Sequence 52 - UGGCUCAGUUCAGCAGGAAC - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40