miRBase entry: chi-mir-26a

Stem-loop chi-mir-26a


Accession
MI0030720
Description
Capra hircus chi-mir-26a precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
11 open access papers mention chi-mir-26a
(20 sentences)

Sequence

aaggccguggccucgUUCAAGUAAUCCAGGAUAGGCUgugcaggucccaaggggCCUAUUCUCGGUUACUUGCACGcggacgcgggccug
.((((((((.((.(((.(((((((((.((((((((((.(...........).)))))))))).))))))))).))).)).))).))))).

Structure
a     -   g  u   U         C          g gcag 
 aggcc gug cc cgU CAAGUAAUC AGGAUAGGCU u    g
 ||||| ||| || ||| ||||||||| |||||||||| |    u
 uccgg cgc gg GCA GUUCAUUGG UCUUAUCCgg g    c
g     g   a  c   C         C          g aacc 


Annotation confidence Not enough data
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Genome context
chr22: 11745483-11745572 [+]

Database links

Mature chi-miR-26a-5p

Accession MIMAT0036101
Description Capra hircus chi-miR-26a-5p mature miRNA
Sequence 16 - UUCAAGUAAUCCAGGAUAGGCU - 37
Evidence experimental
Illumina [1]

Mature chi-miR-26a-3p

Accession MIMAT0036102
Description Capra hircus chi-miR-26a-3p mature miRNA
Sequence 55 - CCUAUUCUCGGUUACUUGCACG - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40