Stem-loop sequence chi-mir-26a

Accession

MI0030720 (change log)

Description

Capra hircus miR-26a stem-loop

Gene family

MIPF0000043; mir-26

Literature search

11 open access papers mention chi-mir-26a
(20 sentences)

Stem-loop

   a     -   g  u   u         c          g gca g 
5'  aggcc gug cc cgu caaguaauc aggauaggcu u   g u
    ||||| ||| || ||| ||||||||| |||||||||| |   |  
3'  uccgg cgc gg gca guucauugg ucuuauccgg g   c c
   g     g   a  c   c         c          g -aa c 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CHIR_2.0; GCA_000317765.2): chr22: 11745483-11745572 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030720

Mature sequence chi-miR-26a-5p

• Accession: MIMAT0036101
• Sequence: 16 - uucaaguaauccaggauaggcu - 37
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-26a-3p

• Accession: MIMAT0036102
• Sequence: 55 - ccuauucucgguuacuugcacg - 76
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).