miRBase entry: chi-mir-29a

Stem-loop chi-mir-29a


Accession
MI0030726
Description
Capra hircus chi-mir-29a precursor miRNA
Gene family
MIPF0000009; mir-29

Literature search
8 open access papers mention chi-mir-29a
(22 sentences)

Sequence

ccccuuagaggaugACUGAUUUCUUUUGGUGUUCAgagucaauauaauuuucUAGCACCAUCUGAAAUCGGUUauaaugauugggga
((((....(..((((((((((((...(((((((.((((...........)))))))))))...))))))))))))..)....)))).

Structure
-    uuag gg            UUU       C    ucaa 
 cccc    a  augACUGAUUUC   UGGUGUU Agag    u
 ||||    |  ||||||||||||   ||||||| ||||    a
 gggg    u  uaUUGGCUAAAG   ACCACGA Ucuu    u
a    uuag aa            UCU       -    uuaa 


Annotation confidence Not enough data
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Genome context
chr4: 97291653-97291739 [-]

Database links

Mature chi-miR-29a-5p

Accession MIMAT0036112
Description Capra hircus chi-miR-29a-5p mature miRNA
Sequence 15 - ACUGAUUUCUUUUGGUGUUCA - 35
Evidence experimental
Illumina [1]

Mature chi-miR-29a-3p

Accession MIMAT0036113
Description Capra hircus chi-miR-29a-3p mature miRNA
Sequence 53 - UAGCACCAUCUGAAAUCGGUU - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40