miRBase entry: chi-mir-30a

Stem-loop chi-mir-30a


Accession
MI0030731
Description
Capra hircus chi-mir-30a precursor miRNA
Gene family
MIPF0000005; mir-30

Literature search
8 open access papers mention chi-mir-30a
(14 sentences)

Sequence

ucccugugacagugagcggcUGUAAACAUCCUCGACUGGAAGCUgugaggcugcagaaaggCUUUCAGUCGGAUGUUUGCAGcugcugacugccgcccacgucagga
..((((((.((((.(((((((((((((((((..(((((((((((...............)))))))))))))))))))))))))))).)))).))).......))).

Structure
uc   -------   a    g                 UC           gugagg 
  ccu       gug cagu agcggcUGUAAACAUCC  GACUGGAAGCU      c
  |||       ||| |||| |||||||||||||||||  |||||||||||      u
  gga       cgc guca ucgucGACGUUUGUAGG  CUGACUUUCgg      g
-a   cugcacc   c    g                 --           aaagac 


Annotation confidence Not enough data
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Genome context
chr14: 2517238-2517344 [+]

Database links

Mature chi-miR-30a-5p

Accession MIMAT0036121
Description Capra hircus chi-miR-30a-5p mature miRNA
Sequence 21 - UGUAAACAUCCUCGACUGGAAGCU - 44
Evidence experimental
Illumina [1]

Mature chi-miR-30a-3p

Accession MIMAT0036122
Description Capra hircus chi-miR-30a-3p mature miRNA
Sequence 62 - CUUUCAGUCGGAUGUUUGCAG - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40