miRBase entry: chi-mir-33a

Stem-loop chi-mir-33a


Accession
MI0030749
Description
Capra hircus chi-mir-33a precursor miRNA
Gene family
MIPF0000070; mir-33

Literature search
4 open access papers mention chi-mir-33a
(9 sentences)

Sequence

ugcugcgGUGCAUUGUAGUUGCAUUGCauguuccggcggcaccgugCAAUGUUUCCACAGUGCAUCAcagaggccug
..(((.((((((((((.(..((((((((((.(((...)).).))))))))))..).)))))))))).))).......

Structure
-----ug   c          A UU          u -  g 
       cug gGUGCAUUGU G  GCAUUGCaug u cc  
       ||| |||||||||| |  |||||||||| | || g
       gac CUACGUGACA C  UGUAACgugc a gg  
guccgga   A          C UU          c c  c 


Annotation confidence Not enough data
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Genome context
chr5: 114359915-114359991 [+]

Database links

Mature chi-miR-33a-5p

Accession MIMAT0036151
Description Capra hircus chi-miR-33a-5p mature miRNA
Sequence 8 - GUGCAUUGUAGUUGCAUUGC - 27
Evidence experimental
Illumina [1]

Mature chi-miR-33a-3p

Accession MIMAT0036152
Description Capra hircus chi-miR-33a-3p mature miRNA
Sequence 47 - CAAUGUUUCCACAGUGCAUCA - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40