miRBase entry: chi-mir-369

Stem-loop chi-mir-369


Accession
MI0030764
Description
Capra hircus chi-mir-369 precursor miRNA
Gene family
MIPF0000018; mir-154

Literature search
1 open access papers mention chi-mir-369
(2 sentences)

Sequence

agcaucucuccugguaccugaagggAGAUCGACCGUGUUAUAUUCGcuuuauugacuucgAAUAAUACAUGGUUGAUCUUUucucaguaucaaaucucaccuuggag
.......((((((((((.(((.((((((((((((((((..((((((............))))))..)))))))))))))))).)))))))))...........))))

Structure
agcaucu    -----------      c   a                UA      cuuua 
       cucc           ugguac uga gggAGAUCGACCGUGU  UAUUCG     u
       ||||           |||||| ||| ||||||||||||||||  ||||||      
       gagg           acuaug acu uUUUCUAGUUGGUACA  AUAAgc     u
-------    uuccacucuaa      -   c                UA      uucag 


Annotation confidence Not enough data
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Genome context
chr21: 67143159-67143265 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from chi-mir-369
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-369-5p

Accession MIMAT0036178
Description Capra hircus chi-miR-369-5p mature miRNA
Sequence 26 - AGAUCGACCGUGUUAUAUUCG - 46
Evidence experimental
Illumina [1]

Mature chi-miR-369-3p

Accession MIMAT0036179
Description Capra hircus chi-miR-369-3p mature miRNA
Sequence 61 - AAUAAUACAUGGUUGAUCUUU - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40