miRBase entry: chi-mir-376b

Stem-loop chi-mir-376b


Accession
MI0030768
Description
Capra hircus chi-mir-376b precursor miRNA
Gene family
MIPF0000091; mir-368

Literature search
2 open access papers mention chi-mir-376b
(2 sentences)

Sequence

ucuuucuuugguauuuaaaaGGUGGAUAUUCCUUCUAUGUUUacgugauucauagauaAUCAUAGAGGAAAAUCCAUguuuucaguaucaaaugcuacucugga
......(((((((((.((((.((((((.(((((.(((((.(((.(((...)))...))).)))))))))).)))))).)))).)))))))))............

Structure
------ucuuuc         u    G      A     U     U   --c   a 
            uuugguauu aaaa GUGGAU UUCCU CUAUG UUa   gug  
            ||||||||| |||| |||||| ||||| ||||| |||   ||| u
            aaacuauga uuuu UACCUA AAGGA GAUAC Aau   uac  
aggucucaucgu         c    g      A     -     U   aga   u 


Annotation confidence Not enough data
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Genome context
chr21: 67117609-67117712 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from chi-mir-376b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-376b-5p

Accession MIMAT0036185
Description Capra hircus chi-miR-376b-5p mature miRNA
Sequence 21 - GGUGGAUAUUCCUUCUAUGUUU - 42
Evidence experimental
Illumina [1]

Mature chi-miR-376b-3p

Accession MIMAT0036186
Description Capra hircus chi-miR-376b-3p mature miRNA
Sequence 59 - AUCAUAGAGGAAAAUCCAU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40