miRBase entry: chi-mir-376c

Stem-loop chi-mir-376c


Accession
MI0030769
Description
Capra hircus chi-mir-376c precursor miRNA
Gene family
MIPF0000091; mir-368

Literature search
1 open access papers mention chi-mir-376c
(1 sentences)

Sequence

ggacuaaauccuucuuugguauuuaaaaGGUGGAUAUUCCUUCUAUGUUUauguuauuuaugguuaAACAUAGAGGAAAUUCCACGUuuucaguaucaaaugcugcuuggaa
(((.....)))...(((((((((.((((.(((((..(((((.(((((((((.............))))))))))))))..))))).)))).)))))))))............

Structure
ggacuaaauccuuc         u    G     UA     U         uguua 
              uuugguauu aaaa GUGGA  UUCCU CUAUGUUUa     u
              ||||||||| |||| |||||  ||||| |||||||||     u
              aaacuauga uuuU CACCU  AAGGA GAUACAAau     u
--aagguucgucgu         c    G     UA     -         uggua 


Annotation confidence Not enough data
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Genome context
chr21: 67116853-67116964 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from chi-mir-376c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-376c-5p

Accession MIMAT0036187
Description Capra hircus chi-miR-376c-5p mature miRNA
Sequence 29 - GGUGGAUAUUCCUUCUAUGUUU - 50
Evidence experimental
Illumina [1]

Mature chi-miR-376c-3p

Accession MIMAT0036188
Description Capra hircus chi-miR-376c-3p mature miRNA
Sequence 67 - AACAUAGAGGAAAUUCCACGU - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40