miRBase entry: chi-mir-432

Stem-loop chi-mir-432


Accession
MI0030792
Description
Capra hircus chi-mir-432 precursor miRNA
Gene family
MIPF0000211; mir-432

Literature search
3 open access papers mention chi-mir-432
(10 sentences)

Sequence

gcaugacuccuccaagUCUUGGAGUAGGUCAUUGGGUGGauccuuuauuucccuaugugggccACUGGAUGGCUCCUCCAUGUCUuggcg
...........(((((.(.(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).).)))))..

Structure
gcaugacuccu     U U     UA       G     a   uu   uu 
           ccaag C UGGAG  GGUCAUU GGUGG ucc  uau  c
           ||||| | |||||  ||||||| ||||| |||  |||   
           gguUC G ACCUC  UCGGUAG UCAcc ggg  gua  c
---------gc     U U     -C       G     -   -u   uc 


Annotation confidence Not enough data
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Genome context
chr21: 66966894-66966983 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from chi-mir-432
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-432-5p

Accession MIMAT0036227
Description Capra hircus chi-miR-432-5p mature miRNA
Sequence 17 - UCUUGGAGUAGGUCAUUGGGUGG - 39
Evidence experimental
Illumina [1]

Mature chi-miR-432-3p

Accession MIMAT0036228
Description Capra hircus chi-miR-432-3p mature miRNA
Sequence 64 - ACUGGAUGGCUCCUCCAUGUCU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40