miRBase entry: chi-mir-493

Stem-loop chi-mir-493


Accession
MI0030807
Description
Capra hircus chi-mir-493 precursor miRNA
Gene family
MIPF0000230; mir-493

Literature search
5 open access papers mention chi-mir-493
(16 sentences)

Sequence

ggggcucccucuggcccccagggccUUGUACAUGGUAGGCUUUCAUUcauucguuugcacauucggUGAAGGUCUACUGUGUGCCAGGcccugugccaggcagcaaguaaaugga
...(((...((((((...((((((((.((((((((((((((((((((.................)))))))))))))))))))).)))))))).)))))).)))...........

Structure
--------ggg   ccc      ccc        U                    cauucgu 
           gcu   ucuggc   cagggccU GUACAUGGUAGGCUUUCAUU       u
           |||   ||||||   |||||||| ||||||||||||||||||||       u
           cga   ggaccg   gucccGGA CGUGUGUCAUCUGGAAGUgg       g
agguaaaugaa   --c      --u        C                    cuuacac 


Annotation confidence Not enough data
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Genome context
chr21: 66936079-66936193 [+]

Database links

Mature chi-miR-493-5p

Accession MIMAT0036253
Description Capra hircus chi-miR-493-5p mature miRNA
Sequence 26 - UUGUACAUGGUAGGCUUUCAUU - 47
Evidence experimental
Illumina [1]

Mature chi-miR-493-3p

Accession MIMAT0036254
Description Capra hircus chi-miR-493-3p mature miRNA
Sequence 67 - UGAAGGUCUACUGUGUGCCAGG - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40