Stem-loop chi-mir-502a

Accession

MI0030814

Description

Capra hircus chi-mir-502a precursor miRNA

Gene family

MIPF0000139; mir-500

Literature search

1 open access papers mention chi-mir-502a
(1 sentences)

Sequence

ugcccaccccucuaauccuugcucucugggugcuagugcugucuccaugcgAUGCACCUGGACAAGGAUUCagagagggugggcu
.((((((((((((((((((((...(((((((((...(((((....)).)))..))))))))))))))))).)))).)))))))).

Structure

u        -    -        cuc         uag   -  u 
 gcccaccc cucu aauccuug   ucugggugc   ugc ug c
 |||||||| |||| ||||||||   |||||||||   ||| ||  
 cggguggg gaga UUAGGAAC   AGGUCCACG   gcg ac u
u        a    C        ---         -UA   u  c 

Annotation confidence Not enough data

Genome context

chrX: 82599100-82599184 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from chi-mir-502a

Mature chi-miR-502a

• Accession: MIMAT0036265
• Description: Capra hircus chi-miR-502a mature miRNA
• Sequence: 52 - AUGCACCUGGACAAGGAUUC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40