miRBase entry: chi-mir-874

Stem-loop chi-mir-874


Accession
MI0030836
Description
Capra hircus chi-mir-874 precursor miRNA
Gene family
MIPF0000401; mir-874

Literature search
1 open access papers mention chi-mir-874
(3 sentences)

Sequence

gcuccuucggaugaauuuuugguguuagcccugCGGCCCCACGCACCAGGGUAAGAgagacucgcuucCUGCCCUGGCCCGAGGGACCGACuggcugggccugccuucug
..(((...))).(((.....(((..(((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))).)))....)))..

Structure
gcuccuucggau   uuuuu   gu     cug   C   A  CA        A   aga 
            gaa     ggu  uagcc   CGG CCC CG  CCAGGGUA GAg   c
            |||     |||  |||||   ||| ||| ||  |||||||| |||    
            cuu     ccg  gucgg   GCC GGG GC  GGUCCCGU cuu   u
----------gu   -ccgu   -g     uCA   A   A  CC        C   cgc 


Annotation confidence Not enough data
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Genome context
chr7: 48306811-48306920 [-]

Database links

Mature chi-miR-874-5p

Accession MIMAT0036296
Description Capra hircus chi-miR-874-5p mature miRNA
Sequence 34 - CGGCCCCACGCACCAGGGUAAGA - 56
Evidence experimental
Illumina [1]

Mature chi-miR-874-3p

Accession MIMAT0036297
Description Capra hircus chi-miR-874-3p mature miRNA
Sequence 69 - CUGCCCUGGCCCGAGGGACCGAC - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40