miRBase entry: chi-mir-92b

Stem-loop chi-mir-92b


Accession
MI0030840
Description
Capra hircus chi-mir-92b precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
2 open access papers mention chi-mir-92b
(2 sentences)

Sequence

cccauucauucauggguggggauuuguugcacugcuuguguuauauguaaagUAUUGCACUUGUCCCGGCCUGUggaagaaacgagg
....(((.(((((((((.(((((..((.(((.(((((............))))).)))))..))))).))))))))).)))......

Structure
--ccca   a         g     uu  u   c     guguu 
      uuc uucaugggu gggau  gu gca ugcuu     a
      ||| ||||||||| |||||  || ||| |||||      
      aag aggUGUCCG CCCUG  CA CGU AUgaa     u
ggagca   a         G     UU  -   U     augua 


Annotation confidence Not enough data
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Genome context
chrX: 40074814-40074900 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from chi-mir-92b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-92b

Accession MIMAT0036304
Description Capra hircus chi-miR-92b mature miRNA
Sequence 53 - UAUUGCACUUGUCCCGGCCUGU - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40