miRBase entry: chi-mir-98

Stem-loop chi-mir-98


Accession
MI0030844
Description
Capra hircus chi-mir-98 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
1 open access papers mention chi-mir-98
(1 sentences)

Sequence

aggacucugcucaugcuggggUGAGGUAGUAAGUUGUAUUGUUgugggguagggauuuuaggccccaauuagaagauaaCUAUACAACUUACUACUUUCCCugguguguagcacauuca
..((...((((((((((((((.(((((((((((((((((.((((((((((...........)))))).........)))).))))))))))))))))))))))))))).))))...)).

Structure
ag  cuc    -          U                 U    ---------      aggg 
  ga   ugcu caugcugggg GAGGUAGUAAGUUGUAU GUUg         uggggu    a
  ||   |||| |||||||||| ||||||||||||||||| ||||         ||||||    u
  cu   acga gugugguCCC UUUCAUCAUUCAACAUA Caau         accccg    u
-a  uac    u          -                 U    agaagauua      gauu 


Annotation confidence Not enough data
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Genome context
chrX: 90705668-90705786 [-]

Database links

Mature chi-miR-98-5p

Accession MIMAT0036310
Description Capra hircus chi-miR-98-5p mature miRNA
Sequence 22 - UGAGGUAGUAAGUUGUAUUGUU - 43
Evidence experimental
Illumina [1]

Mature chi-miR-98-3p

Accession MIMAT0036311
Description Capra hircus chi-miR-98-3p mature miRNA
Sequence 80 - CUAUACAACUUACUACUUUCCC - 101
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40