Stem-loop ocu-mir-302b

Accession

MI0030987

Description

Oryctolagus cuniculus ocu-mir-302b precursor miRNA

Gene family

MIPF0000071; mir-302

Literature search

1 open access papers mention ocu-mir-302b
(1 sentences)

Sequence

acucccuucaACUUUAACAUGGAGGUGCUUUCugugacuuucguuagaaaaagUAAGUGCUUCCAUGUUUUAGUCGaagu
.....((((.(((..(((((((((((((((.((....((......))....)).)))))))))))))))..))).)))).

Structure

acucc    a   UU               U  guga  uu 
     cuuc ACU  AACAUGGAGGUGCUU Cu    cu  c
     |||| |||  ||||||||||||||| ||    ||   
     gaaG UGA  UUGUACCUUCGUGAA ga    ga  g
----u    C   UU               U  aaaa  uu 

Annotation confidence Not enough data

Genome context

CM000804.1: 36769627-36769706 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ocu-mir-302b

Mature ocu-miR-302b-5p

• Accession: MIMAT0036316
• Description: Oryctolagus cuniculus ocu-miR-302b-5p mature miRNA
• Sequence: 11 - ACUUUAACAUGGAGGUGCUUUC - 32
• Evidence: experimental ; SOLiD [1]

Mature ocu-miR-302b-3p

• Accession: MIMAT0036317
• Description: Oryctolagus cuniculus ocu-miR-302b-3p mature miRNA
• Sequence: 54 - UAAGUGCUUCCAUGUUUUAGUCG - 76
• Evidence: experimental ; SOLiD [1], Illumina [2]

References

1. PubMed ID: 23426804
   Discovery of pluripotency-associated microRNAs in rabbit preimplantation embryos and embryonic stem-like cells
   "Maraghechi P, Hiripi L, Toth G, Bontovics B, Bosze Z, Gocza E"
   "Reproduction (2013) 145:421-437


2. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344