miRBase entry: gma-MIR9730

Stem-loop gma-MIR9730


Accession
MI0031011
Description
Glycine max gma-MIR9730 precursor miRNA


Sequence

aggcuugcagcaguuaugacaacaauugugggguuuuguguugcaaucaugacuauuuaagcuuuuggcuuagguuccauuuuugcucuugguucaaagguggaaaaauugguuuugcccauaaaaauguuuauuuacaccuuggaaccaggggugaaauugacacaucggcaaaaaaauuaaauuugcaugauugcaaugugaaaucccaCGAUUGCUGUCAUAACUGCUGCaaggc
.(.((((((((((((((((((.(((((((((((((((((((((((((((((...((((((..((((.(((...((..((.(((((((((((((((.((((((..((.....(((((.......))))).....))..)))))).))))))))))))))).))..))...))).))))..))))))...))))))))))))))))))))))))))))).)))))))))))))))))).)

Structure
a g                  a                             acu      gc    g   uag  uc  u               a      ga  aauug     gc 
 g cuugcagcaguuaugaca caauugugggguuuuguguugcaaucaug   auuuaa  uuuu gcu   gu  ca uuuugcucuugguuc aaggug  aa     guuuu  c
 | |||||||||||||||||| |||||||||||||||||||||||||||||   ||||||  |||| |||   ||  || ||||||||||||||| ||||||  ||     |||||  c
 c gaaCGUCGUCAAUACUGU GUUAGCacccuaaaguguaacguuaguac   uaaauu  aaaa cgg   ca  gu aaaguggggaccaag uuccac  uu     uaaaa  a
- g                  C                             guu      aa    a   cua  ca  u               g      au  auuug     au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr20: 37550244-37550481 [-]

Database links

Mature gma-miR9730

Accession MIMAT0036349
Description Glycine max gma-miR9730 mature miRNA
Sequence 212 - CGAUUGCUGUCAUAACUGCUGC - 233
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153