miRBase entry: gma-MIR9746h

Stem-loop gma-MIR9746h


Accession
MI0031035
Description
Glycine max gma-MIR9746h precursor miRNA
Gene family
MIPF0001884; MIR9746


Sequence

acaguucuccaauugagauucaagcacuuuucuauguggcuuuaagguguguuuuauugcaugagcaagauguugaaugcagggauucauaaaacaaauugucauacuuuugcaugccuuaaguucucagcugagaaguuauuuuuggucagauuuaaagcaacuuaacuacauaugucaccuuaaaacagaacaguacucaucuauugcuauuacuauugcggugcaacaaauuuaauguuagaagaaugacauuaaacuuguuguguauaguauuugaguacucuucuauuuugaagcaauauaagugguuaaguuguuucgaauccaaccaaaaauaguuuagcuuaaggcaugcaauuguuugacaauuuguucuauuaauucauugcauucaacauuuugccuaagcaauugcauggaacaccuuaaauccaugaagaAAAGUGUUUGAAUCUCAAUUAGAUaacca
...(((.((.(((((((((((((((((((((((.(((((.((((((((((.....(((((.((.(((((((((((((((((((((((.(((.((((((((((((.((..(((((((((((((((((((....))))..(((((((((((..(((((.(((((((((((((((.(((((..(.((((((.((((.((((((((.....((((((.((.........(((((((.((((((((((......)))))))))).)))))))))))))))..)))))))).)))).)))))).)..))))).))))))))))))))).)))))..)))))))))))....)))))))))))))))..)).)))))))))))).))).))))).)))))))))))))))))).)).)))))........)))))))))).))))).))))))))))))))))))))))).)).)))..

Structure
aca   c  c                       a     c          ---guuuu     a  a                  -     c   a            u  uu               ucucagcugagaag           ca     a               a     ca c      c    c        ucuau      u  uauugcggu       a          ga 
   guu uc aauugagauucaagcacuuuucu ugugg uuuaaggugu        auugc ug gcaagauguugaaugcag ggauu aua aacaaauuguca ac  uugcaugccuuaagu              uuauuuuuggu  gauuu aagcaacuuaacuac uaugu  c uuaaaa agaa aguacuca     ugcuau ac         gcaacaa uuuaauguua  a
   ||| || ||||||||||||||||||||||| ||||| ||||||||||        ||||| || |||||||||||||||||| ||||| ||| |||||||||||| ||  |||||||||||||||              |||||||||||  ||||| ||||||||||||||| |||||  | |||||| |||| ||||||||     |||||| ||         ||||||| ||||||||||   
   caa AG UUAACUCUAAGUUUGUGAAAaga guacc aaauuccaca        uaacg au cguuuuacaacuuacguu cuuaa uau uuguuuaacagu ug  aacguacggaauucg              gauaaaaacca  cuaag uuuguugaauuggug auaua  g aguuuu ucuu ucaugagu     augaua ug         uguuguu aaauuacagu  g
-ac   U  A                       a     u          agguacgu     a  c                  a     u   c            u  uu               ----------auuu           ac     c               a     ac a      a    c        ---uu      -  ---------       c          aa 


Annotation confidence Not enough data
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Genome context
chr8: 11768911-11769382 [-]

Database links

Mature gma-miR9746h

Accession MIMAT0036373
Description Glycine max gma-miR9746h mature miRNA
Sequence 444 - AAAGUGUUUGAAUCUCAAUUAGAU - 467
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153