Stem-loop gma-MIR167k

Accession

MI0031050

Description

Glycine max gma-MIR167k precursor miRNA

Literature search

27 open access papers mention gma-MIR167k
(180 sentences)

Sequence

7606 reads, 20.0 reads per million, 158 experiments

cugguUGAAGCUGCCAGCCUGAUCUUAacuuuucucuuuuauuaggaAAAGAUCAGAUCAUGUGGuagccuucaccuagu
((((.(((((((((((.(.((((((...((((((.((......))))))))...)))))).))))))).))))).)))).

Structure

-    u     -      G C      UAa      u  uu 
 cugg UGAAG CUGCCA C UGAUCU   cuuuuc cu  u
 |||| ||||| |||||| | ||||||   |||||| ||   
 gauc acuuc gauGGU G ACUAGA   GAAAag ga  a
u    c     c      - U      CUA      -  uu 

Annotation confidence Medium

Genome context

chr2: 307525-307604 [-]

Mature gma-miR167k-5p

• Accession: MIMAT0036388
• Description: Glycine max gma-miR167k-5p mature miRNA
• Sequence: 6 - UGAAGCUGCCAGCCUGAUCUUA - 27
• Evidence: experimental ; Illumina [1]

Mature gma-miR167k-3p

• Accession: MIMAT0054455
• Description: Glycine max gma-miR167k-3p mature miRNA
• Sequence: 48 - AAAGAUCAGAUCAUGUGG - 65
• Evidence: experimental ; unknown

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153